Publications and posters
Posters describing areas of this work
In-vivo segmentation and tracking of cells using confocal microscopy.
Optical flow analysis of time-lapse confocal microscopy images.
Links
Archiroot website - quantitative methods in root architecture analysis
Publications
Roberts, T.J., McKenna, S.J., Wuyts, N., Valentine, T.A. and Bengough, A.G. 2007. Performance of low-level motion estimation methods for confocal microscopy of plant cells in vivo. Institute of Electrical and Electronics Engineers Workshop on Applications of Computer Vision, Austin, Texas, 21-22 February 2007. 372-382.
Roberts, T.J., McKenna, S.J., Hans, J., Valentine, T.A. and Bengough, A.G. 2006. Part-based multiframe registration for estimation of the growth of cellular networks in plant roots. 18th International Conference on Pattern Recognition, Hong Kong, 20-24 August 2006. 378-382.
Roberts, T.J., McKenna, S.J., Du, C.J., Wuyts, N., Valentine, T.A. and Bengough, A.G. 2008. Estimating the motion of plant root cells from in vivo confocal laser scanning microscopy images. Machine Vision and Applications (submitted).
Dupuy, L.X., Mackenzie, J and Haseloff, J. A biomechanical model for the study of plant morphogenesis: Coleochaete orbicularis. Proceedings of the 5th Plant Biomechanics Conference. Stockholm. (2006) Dupuy L, Mackenzie J, Rudge T, Haseloff J. A system for modelling cell- cell interactions during plant morphogenesis. Annals of Botany101:1255-1265 (2008) Bengough, A.G., Bransby, M.F., Hans, J., McKenna, S.J., Roberts, T.J. and Valentine, T.A. 2006. Root responses to soil physical conditions; growth dynamics from field to cell. Journal of Experimental Botany 57, 437-447.
